STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsRTranscriptional regulator, ArsR family. (120 aa)    
Predicted Functional Partners:
cadA
Cadmium, zinc and cobalt-transporting ATPase.
 
  
 0.869
Epro_0982
ABC transporter.
  
    0.598
Epro_0983
Transporter.
       0.575
tetR
Putative Transcriptional regulator.
  
  
 0.521
Epro_0981
Putative 36 kDa antigen; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.518
Epro_0980
Exported protein of unknown function.
     
 0.484
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein.
  
  
 0.442
Epro_0986
Hypothetical protein.
       0.427
Epro_0987
Conserved exported protein of unknown function.
       0.419
Epro_1266
Transcriptional regulator, XRE family.
  
  
 0.414
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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