STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clsCardiolipin synthase. (486 aa)    
Predicted Functional Partners:
pgpA
Phosphatidylglycerophosphatase A.
     
 0.912
Epro_1258
Peptidase M48 Ste24p.
  
    0.775
Epro_1257
Conserved membrane protein of unknown function.
       0.773
Epro_1259
Hypothetical protein.
       0.752
ddhC
Putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.590
Epro_0870
Lysophosphatidylglycerol synthetase.
  
 0.577
rfbG
CDP-glucose 4,6-dehydratase.
  
    0.550
Epro_1186
NifU-related domain-containing protein.
   
 
 0.529
iscU
Scaffold protein.
   
 
 0.529
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.413
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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