STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621425_00115Unannotated protein. (876 aa)    
Predicted Functional Partners:
GCA_000621425_00975
Unannotated protein.
  
     0.746
GCA_000621425_00116
Unannotated protein.
  
    0.540
GCA_000621425_00117
Unannotated protein.
  
    0.540
GCA_000621425_02364
Unannotated protein.
  
     0.449
GCA_000621425_00118
Unannotated protein.
  
    0.424
GCA_000621425_00121
Unannotated protein.
 
    
0.400
Your Current Organism:
Lachnospiraceae bacterium AB2028
NCBI taxonomy Id: 1408319
Other names: L. bacterium AB2028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.