STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621405_00803Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000621405_00801
Unannotated protein.
     
 0.937
GCA_000621405_00802
Unannotated protein.
 
  
 0.935
GCA_000621405_00800
Unannotated protein.
       0.839
GCA_000621405_00804
Unannotated protein.
  
  
 0.781
GCA_000621405_00799
Unannotated protein.
       0.763
GCA_000621405_01329
Unannotated protein.
  
  
 0.752
GCA_000621405_00573
Unannotated protein.
  
     0.698
GCA_000621405_01306
Unannotated protein.
  
     0.672
GCA_000621405_01387
Unannotated protein.
  
     0.655
GCA_000621405_00825
Unannotated protein.
 
   
 0.616
Your Current Organism:
Lachnospiraceae bacterium AC3007
NCBI taxonomy Id: 1408322
Other names: L. bacterium AC3007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.