STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621405_01652Unannotated protein. (641 aa)    
Predicted Functional Partners:
GCA_000621405_02146
Unannotated protein.
 
 
 0.998
GCA_000621405_01654
Unannotated protein.
    
 0.948
GCA_000621405_01653
Unannotated protein.
  
    0.933
GCA_000621405_01651
Unannotated protein.
 
  
 0.896
GCA_000621405_01650
Unannotated protein.
     
 0.846
GCA_000621405_01305
Unannotated protein.
 
   
 0.845
GCA_000621405_02189
Unannotated protein.
 
   
 0.825
GCA_000621405_00608
Unannotated protein.
     
 0.817
GCA_000621405_01648
Unannotated protein.
  
    0.808
GCA_000621405_01649
Unannotated protein.
  
    0.803
Your Current Organism:
Lachnospiraceae bacterium AC3007
NCBI taxonomy Id: 1408322
Other names: L. bacterium AC3007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.