STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746015_00433Unannotated protein. (535 aa)    
Predicted Functional Partners:
GCA_000746015_01615
Unannotated protein.
  
 0.996
GCA_000746015_00434
Unannotated protein.
 
0.989
GCA_000746015_01880
Unannotated protein.
 0.953
GCA_000746015_00347
Unannotated protein.
    
 0.822
GCA_000746015_02813
Unannotated protein.
   
 
 0.822
GCA_000746015_02313
Unannotated protein.
   
 0.809
GCA_000746015_01881
Unannotated protein.
  
 0.789
GCA_000746015_00548
Unannotated protein.
   
  
 0.774
GCA_000746015_01229
Unannotated protein.
  
 0.718
GCA_000746015_01347
Unannotated protein.
  
 0.718
Your Current Organism:
Lachnospiraceae bacterium MA2020
NCBI taxonomy Id: 1408323
Other names: L. bacterium MA2020
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.