STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746015_00904Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_000746015_00905
Unannotated protein.
 
    0.924
GCA_000746015_00903
Unannotated protein.
 
     0.879
GCA_000746015_00907
Unannotated protein.
 
    0.847
GCA_000746015_00906
Unannotated protein.
 
   
 0.843
GCA_000746015_01992
Unannotated protein.
  
     0.768
GCA_000746015_02662
Unannotated protein.
  
     0.768
GCA_000746015_00580
Unannotated protein.
  
     0.762
GCA_000746015_02158
Unannotated protein.
  
     0.762
GCA_000746015_00901
Unannotated protein.
 
     0.759
GCA_000746015_00916
Unannotated protein.
  
     0.757
Your Current Organism:
Lachnospiraceae bacterium MA2020
NCBI taxonomy Id: 1408323
Other names: L. bacterium MA2020
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.