STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621485_00160Unannotated protein. (559 aa)    
Predicted Functional Partners:
GCA_000621485_00162
Unannotated protein.
 
 
 0.999
GCA_000621485_00163
Unannotated protein.
 
 0.980
GCA_000621485_00172
Unannotated protein.
 
 
 0.967
GCA_000621485_00164
Unannotated protein.
 
 0.939
GCA_000621485_00161
Unannotated protein.
 
  
0.928
GCA_000621485_00171
Unannotated protein.
 
 
 0.928
GCA_000621485_00173
Unannotated protein.
 
 
 0.919
GCA_000621485_00165
Unannotated protein.
  
 0.898
GCA_000621485_00029
Unannotated protein.
  
  
 0.830
GCA_000621485_01595
Unannotated protein.
  
  
 0.801
Your Current Organism:
Alkaliphilus transvaalensis
NCBI taxonomy Id: 1408422
Other names: A. transvaalensis ATCC 700919, Alkaliphilus transvaalensis ATCC 700919
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.