STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621445_03434Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_000621445_04416
Unannotated protein.
   
 0.689
GCA_000621445_03435
Unannotated protein.
       0.567
GCA_000621445_00836
Unannotated protein.
  
 0.540
GCA_000621445_02329
Unannotated protein.
  
 0.540
GCA_000621445_03129
Unannotated protein.
  
 0.540
GCA_000621445_00581
Unannotated protein.
   
 
 0.532
GCA_000621445_04542
Unannotated protein.
    
   0.523
GCA_000621445_02747
Unannotated protein.
   
   0.462
GCA_000621445_04214
Unannotated protein.
   
   0.462
GCA_000621445_04191
Unannotated protein.
   
   0.461
Your Current Organism:
Bacillus bogoriensis
NCBI taxonomy Id: 1408424
Other names: B. bogoriensis ATCC BAA-922, Bacillus bogoriensis ATCC BAA-922
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.