STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701665_00690Unannotated protein. (140 aa)    
Predicted Functional Partners:
GCA_000701665_00689
Unannotated protein.
       0.746
GCA_000701665_00688
Unannotated protein.
       0.515
GCA_000701665_00691
Unannotated protein.
       0.515
GCA_000701665_00687
Unannotated protein.
       0.509
GCA_000701665_00160
Unannotated protein.
  
     0.470
GCA_000701665_00701
Unannotated protein.
  
     0.415
Your Current Organism:
Agathobaculum desmolans
NCBI taxonomy Id: 1408437
Other names: A. desmolans ATCC 43058, Agathobaculum desmolans ATCC 43058, Butyricicoccus desmolans ATCC 43058, Eubacterium desmolans ATCC 43058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.