STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701665_01720Unannotated protein. (430 aa)    
Predicted Functional Partners:
GCA_000701665_01937
Unannotated protein.
  
 0.987
GCA_000701665_01721
Unannotated protein.
 
    0.951
GCA_000701665_01718
Unannotated protein.
 
     0.939
GCA_000701665_01712
Unannotated protein.
 
     0.921
GCA_000701665_01711
Unannotated protein.
 
     0.914
GCA_000701665_01982
Unannotated protein.
   
 0.896
GCA_000701665_02532
Unannotated protein.
   
 0.896
GCA_000701665_01723
Unannotated protein.
 
  
 0.890
GCA_000701665_01709
Unannotated protein.
 
   0.846
GCA_000701665_01702
Unannotated protein.
 
     0.840
Your Current Organism:
Agathobaculum desmolans
NCBI taxonomy Id: 1408437
Other names: A. desmolans ATCC 43058, Agathobaculum desmolans ATCC 43058, Butyricicoccus desmolans ATCC 43058, Eubacterium desmolans ATCC 43058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.