STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701665_02129Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_000701665_01502
Unannotated protein.
    
 0.762
GCA_000701665_01457
Unannotated protein.
  
   
 0.639
GCA_000701665_01871
Unannotated protein.
  
     0.604
GCA_000701665_02128
Unannotated protein.
       0.533
GCA_000701665_02105
Unannotated protein.
  
     0.512
GCA_000701665_00439
Unannotated protein.
  
 
  0.467
GCA_000701665_01074
Unannotated protein.
  
     0.459
GCA_000701665_01260
Unannotated protein.
  
     0.453
GCA_000701665_01473
Unannotated protein.
 
     0.433
GCA_000701665_01867
Unannotated protein.
  
     0.429
Your Current Organism:
Agathobaculum desmolans
NCBI taxonomy Id: 1408437
Other names: A. desmolans ATCC 43058, Agathobaculum desmolans ATCC 43058, Butyricicoccus desmolans ATCC 43058, Eubacterium desmolans ATCC 43058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.