STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701665_02529Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000701665_02530
Unannotated protein.
 
  
 0.974
GCA_000701665_02531
Unannotated protein.
 
  
 0.972
GCA_000701665_02532
Unannotated protein.
  
  
 0.866
GCA_000701665_01982
Unannotated protein.
  
  
 0.762
GCA_000701665_01483
Unannotated protein.
   
  
 0.720
GCA_000701665_01048
Unannotated protein.
  
     0.667
GCA_000701665_00579
Unannotated protein.
  
     0.557
GCA_000701665_00975
Unannotated protein.
  
     0.511
GCA_000701665_01897
Unannotated protein.
  
     0.481
GCA_000701665_01951
Unannotated protein.
  
   
 0.478
Your Current Organism:
Agathobaculum desmolans
NCBI taxonomy Id: 1408437
Other names: A. desmolans ATCC 43058, Agathobaculum desmolans ATCC 43058, Butyricicoccus desmolans ATCC 43058, Eubacterium desmolans ATCC 43058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.