STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH47170.1Hypothetical protein; TIGRFAM: Rhs_assc_core: RHS repeat-associated core domain. (626 aa)    
Predicted Functional Partners:
KOH43818.1
Hypothetical protein.
  
 
  0.546
KOH43770.1
Pfam: SusE outer membrane protein.
   
 
 0.508
KOH43415.1
Hypothetical protein.
   
 
 0.508
KOH46779.1
Hypothetical protein.
   
 
 0.446
KOH45063.1
Hypothetical protein.
   
 
 0.446
KOH44849.1
Pfam: Protein of unknown function (DUF3584).
   
 
 0.446
KOH47169.1
Hypothetical protein.
       0.437
KOH45236.1
Hypothetical protein; SMART: Cation transporter/ATPase, N-terminus; Pfam: haloacid dehalogenase-like hydrolase; Pfam: Cation transporting ATPase, C-terminus; TIGRFAM: ATPase_P-type: HAD ATPase, P-type, family IC; Pfam: Cation transporter/ATPase, N-terminus; Pfam: E1-E2 ATPase; PRINTS: P-type cation-transporting ATPase superfamily signature; PRINTS: H+-transporting ATPase (proton pump) signature.
   
    0.426
KOH46474.1
Hypothetical protein; Pfam: Trehalose utilisation.
    
  0.400
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.