STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH47052.1Hypothetical protein; Pfam: Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family. (409 aa)    
Predicted Functional Partners:
KOH47053.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.675
KOH47054.1
TIGRFAM: toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family; Pfam: Plasmid encoded toxin Txe.
       0.675
KOH42841.1
Transcriptional regulator; Pfam: Helix-turn-helix domain.
  
     0.628
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.618
KOH42923.1
Transcriptional regulator; Pfam: Helix-turn-helix domain.
  
     0.595
KOH46208.1
Transcriptional regulator; Pfam: Helix-turn-helix domain.
  
     0.592
KOH44887.1
Transcriptional regulator; Pfam: Helix-turn-helix domain.
  
     0.584
KOH43651.1
Transcriptional regulator; Pfam: Helix-turn-helix domain.
  
     0.564
KOH46207.1
Hypothetical protein.
  
     0.535
KOH43652.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.