STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH47003.1PRINTS: Bacterial regulatory protein ArsR family signature; Pfam: Helix-turn-helix domain; SMART: helix_turn_helix, Arsenical Resistance Operon Repressor. (101 aa)    
Predicted Functional Partners:
KOH47004.1
Pfam: 6-pyruvoyl tetrahydropterin synthase.
       0.587
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.519
KOH47002.1
Pfam: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.496
cobB
Hypothetical protein; Pfam: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
  
 
  0.446
KOH47001.1
Zinc transporter ZitB; TIGRFAM: CDF: cation diffusion facilitator family transporter; Pfam: Cation efflux family.
     
 0.400
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.