STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH46949.1Hypothetical protein; Pfam: Endonuclease/Exonuclease/phosphatase family. (332 aa)    
Predicted Functional Partners:
KOH46948.1
Phosphatase; TIGRFAM: HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3; Pfam: Haloacid dehalogenase-like hydrolase; TIGRFAM: PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase.
       0.752
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.695
KOH42813.1
Hypothetical protein; Pfam: Glutamine amidotransferase class-I.
    
  0.695
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.548
KOH46947.1
Cation transporter; Pfam: Small Multidrug Resistance protein.
  
    0.506
KOH44777.1
TIGRFAM: AMN-like: putative AMP nucleosidase; Pfam: Phosphorylase superfamily.
  
  
  0.503
KOH44416.1
Oxidoreductase, 2-nitropropane dioxygenase family protein; Pfam: Nitronate monooxygenase.
  
  
  0.500
KOH45096.1
Pfam: Phosphorylase superfamily.
  
  
  0.490
KOH44011.1
Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region.
    
  0.472
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: MGS-like domain; Pfam: MGS-like domain; SMART: AICARFT/IMPCHase bienzyme; Pfam: AICARFT/IMPCHase bienzyme.
    
  0.462
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.