STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH46915.1Pfam: Dolichyl-phosphate-mannose-protein mannosyltransferase. (545 aa)    
Predicted Functional Partners:
KOH46916.1
Hypothetical protein.
       0.773
KOH46791.1
Pfam: Glycosyl transferase family 2.
 
 
  0.725
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
  
  0.670
KOH47018.1
3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
  
  0.649
KOH46917.1
Hypothetical protein.
       0.560
KOH46918.1
Hypothetical protein.
       0.560
KOH45919.1
Pfam: Glycosyl transferase family 2.
 
 
  0.546
KOH43967.1
Hypothetical protein; Pfam: Glycosyl transferase family 2.
 
 
  0.517
KOH43463.1
Hypothetical protein; Pfam: Bacterial lipid A biosynthesis acyltransferase.
  
  
 0.466
KOH43465.1
Hypothetical protein; Pfam: Bacterial lipid A biosynthesis acyltransferase.
  
  
 0.458
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.