STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH46577.1Hypothetical protein; Pfam: Complex I intermediate-associated protein 30 (CIA30). (178 aa)    
Predicted Functional Partners:
KOH46578.1
Hypothetical protein; Pfam: EamA-like transporter family.
       0.741
KOH47043.1
Hypothetical protein.
    
 0.591
KOH46591.1
Pfam: Penicillin-binding Protein dimerisation domain; Pfam: Penicillin binding protein transpeptidase domain; TIGRFAM: pbp2_mrdA: penicillin-binding protein 2.
    
 0.591
KOH42502.1
Pfam: Penicillin binding protein transpeptidase domain; Pfam: Penicillin-binding Protein dimerisation domain; Pfam: PASTA domain; SMART:.
    
 0.591
KOH46576.1
Hypothetical protein.
       0.532
KOH42617.1
Hypothetical protein; Pfam: Gram-negative bacterial TonB protein C-terminal.
  
 
 0.508
KOH44278.1
Hypothetical protein; Pfam: PASTA domain; SMART:.
   
 
 0.456
KOH43508.1
Hypothetical protein; SMART: Tetratricopeptide repeats; Pfam: Tetratricopeptide repeat; Pfam: TPR repeat.
 
     0.440
KOH44359.1
Hypothetical protein; Pfam: Sporulation related domain.
    
   0.424
KOH43368.1
Hypothetical protein; Pfam: Sporulation related domain.
    
   0.424
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.