STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH46039.1Pfam: Protein of unknown function (DUF3365). (195 aa)    
Predicted Functional Partners:
KOH43157.1
Pfam: Cytochrome C oxidase, mono-heme subunit/FixO; Pfam: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: ccoO: cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: ccoN: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.829
KOH46038.1
Hypothetical protein.
       0.718
KOH42973.1
Pfam: Glucose / Sorbosone dehydrogenase; Pfam: Cytochrome C oxidase, cbb3-type, subunit III.
  
 
 0.647
KOH45077.1
Nitric oxide reductase large subunit-like protein; Pfam: Cytochrome C and Quinol oxidase polypeptide I.
  
 
 0.643
KOH43869.1
Hypothetical protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
     0.545
KOH44694.1
Multidrug transporter AcrB; PRINTS: Acriflavin resistance protein family signature; Pfam: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.536
KOH44692.1
Pfam: Protein of unknown function (DUF2892).
 
  
  0.527
KOH45586.1
Hypothetical protein; TIGRFAM: caa3_sub_IV: caa(3)-type oxidase, subunit IV; Pfam: Prokaryotic Cytochrome C oxidase subunit IV.
    
 0.526
KOH45584.1
Hypothetical protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
 0.519
KOH46037.1
Hypothetical protein.
       0.517
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.