STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45966.1Hypothetical protein; Pfam: ATP-dependent DNA helicase recG C-terminal. (154 aa)    
Predicted Functional Partners:
KOH45965.1
Hypothetical protein.
       0.773
KOH42637.1
Pfam: Uncharacterized protein conserved in bacteria (DUF2264).
  
     0.701
KOH42664.1
Hypothetical protein; Pfam: ATP-dependent DNA helicase recG C-terminal; Pfam: Winged helix-turn-helix DNA-binding; Pfam: Divergent AAA domain.
  
     0.697
KOH45967.1
Transcriptional regulator; Pfam: ATP-dependent DNA helicase recG C-terminal; Pfam: Divergent AAA domain.
 
     0.661
KOH42681.1
Hypothetical protein; Pfam: ATP-dependent DNA helicase recG C-terminal.
  
     0.627
KOH45749.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4185).
  
     0.616
KOH46769.1
Hypothetical protein; Pfam: SusD family; Pfam: Starch-binding associating with outer membrane.
  
     0.606
KOH45747.1
Pfam: Protein of unknown function (DUF2961).
  
     0.560
KOH43727.1
Pfam: Divergent AAA domain; Pfam: ATP-dependent DNA helicase recG C-terminal.
  
  
  0.541
KOH47177.1
Hypothetical protein; Pfam: Helix-turn-helix domain; SMART: Helix-turn-helix XRE-family like proteins.
  
     0.519
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.