STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45870.1Hypothetical protein. (39 aa)    
Predicted Functional Partners:
KOH45871.1
Hypothetical protein; Pfam: Alpha/beta hydrolase family.
       0.608
KOH45869.1
TIGRFAM: 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component; Pfam: Transketolase, pyrimidine binding domain; Pfam: Dehydrogenase E1 component; SMART: Transketolase, pyrimidine binding domain.
       0.543
KOH45868.1
2-oxoglutarate dehydrogenase E2; Pfam: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Pfam: Biotin-requiring enzyme; TIGRFAM: sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex.
       0.539
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.