STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45808.1Hypothetical protein; PRINTS: Nickel-dependent hydrogenase/B-type cytochrome signature; Pfam: Prokaryotic cytochrome b561. (216 aa)    
Predicted Functional Partners:
KOH45809.1
Hypothetical protein; Pfam: Cytochrome c3.
    0.979
KOH45724.1
Pfam: Cytochrome b(N-terminal)/b6/petB; PRINTS: Nickel-dependent hydrogenase/B-type cytochrome signature.
  
  
 
0.841
KOH44185.1
Pfam: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.
   
 
  0.794
KOH45723.1
TIGRFAM: octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family; Pfam: Cytochrome c554 and c-prime; Pfam: Cytochrome c bacterial.
 
     0.790
KOH45807.1
Pfam: NapC/NirT cytochrome c family, N-terminal region.
 
    0.759
KOH43068.1
Hypothetical protein; Pfam: Pyridine nucleotide-disulphide oxidoreductase; PRINTS: Pyridine nucleotide disulphide reductase class-I signature; SMART: Rhodanese Homology Domain; Pfam: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pfam: Rhodanese-like domain; PRINTS: FAD-dependent pyridine nucleotide reductase signature.
    
  0.739
KOH46855.1
Pfam: Pyridine nucleotide-disulphide oxidoreductase; PRINTS: Pyridine nucleotide disulphide reductase class-I signature; Pfam: Rhodanese-like domain; SMART: Rhodanese Homology Domain; Pfam: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; PRINTS: FAD-dependent pyridine nucleotide reductase signature.
 
  
  0.709
KOH45810.1
Cytochrome c, mono- and diheme variant family; Pfam: Cytochrome C oxidase, cbb3-type, subunit III.
    
  0.654
KOH44455.1
Hypothetical protein; Pfam: Polysulphide reductase, NrfD.
  
  
  0.578
KOH45812.1
Hypothetical protein; Pfam: Cytochrome c.
    
  0.573
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.