STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45815.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
KOH45816.1
Pfam: Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082).
       0.773
KOH45817.1
Hypothetical protein.
       0.594
KOH45818.1
Hypothetical protein.
       0.462
KOH45814.1
Hypothetical protein; Pfam: Crp-like helix-turn-helix domain; SMART: helix_turn_helix, cAMP Regulatory protein; Pfam: Cyclic nucleotide-binding domain.
       0.420
KOH45819.1
Hypothetical protein; Pfam: SPFH domain / Band 7 family; SMART: prohibitin homologues.
       0.415
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.