STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45768.1Fe-S oxidoreductase; Pfam: Cysteine-rich domain. (240 aa)    
Predicted Functional Partners:
KOH43792.1
Iron-sulfur cluster binding protein; Pfam: Uncharacterised ACR, YkgG family COG1556; Pfam: 4Fe-4S dicluster domain.
 0.996
KOH46511.1
Hypothetical protein; Pfam: Uncharacterised ACR, YkgG family COG1556.
 
 
 0.960
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.919
KOH46959.1
Glutamate synthase; Pfam: GXGXG motif; Pfam: Conserved region in glutamate synthase; Pfam: Glutamine amidotransferases class-II; Pfam: Glutamate synthase central domain.
  
 
 0.878
KOH43068.1
Hypothetical protein; Pfam: Pyridine nucleotide-disulphide oxidoreductase; PRINTS: Pyridine nucleotide disulphide reductase class-I signature; SMART: Rhodanese Homology Domain; Pfam: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pfam: Rhodanese-like domain; PRINTS: FAD-dependent pyridine nucleotide reductase signature.
  
 
 0.809
KOH43599.1
Oxaloacetate decarboxylase; Pfam: HMGL-like; Pfam: Biotin-requiring enzyme; Pfam: Conserved carboxylase domain.
    
 0.808
KOH45642.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.804
KOH45021.1
Pfam: Malic enzyme, NAD binding domain; SMART: Malic enzyme, NAD binding domain; Pfam: Malic enzyme, N-terminal domain; Pfam: Phosphate acetyl/butaryl transferase.
  
 
 0.794
KOH46542.1
MFS transporter; TIGRFAM: OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg.
  
 
 0.774
KOH44794.1
Hypothetical protein; Pfam: Nitrite and sulphite reductase 4Fe-4S domain; PRINTS: Sirohaem Fe-binding site signature; Pfam: Nitrite/Sulfite reductase ferredoxin-like half domain; Pfam: Sulfurtransferase TusA.
  
 0.748
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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