STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45778.1Transcriptional regulator; Pfam: AsnC-type helix-turn-helix domain; SMART: helix_turn_helix ASNC type; PRINTS: AsnC bacterial regulatory protein HTH signature; Pfam: AsnC family. (165 aa)    
Predicted Functional Partners:
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
 0.857
KOH46542.1
MFS transporter; TIGRFAM: OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg.
    
  0.683
KOH46784.1
Transketolase; Pfam: Dehydrogenase E1 component; Pfam: Transketolase, C-terminal domain; Pfam: Transketolase, pyrimidine binding domain; SMART: Transketolase, pyrimidine binding domain.
 
  
 0.591
KOH43014.1
Hypothetical protein; Pfam: 4Fe-4S single cluster domain; Pfam: Radical SAM superfamily.
  
 
 0.577
KOH45021.1
Pfam: Malic enzyme, NAD binding domain; SMART: Malic enzyme, NAD binding domain; Pfam: Malic enzyme, N-terminal domain; Pfam: Phosphate acetyl/butaryl transferase.
 
  
 0.559
KOH42805.1
Acetolactate synthase; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Pfam: Thiamine pyrophosphate enzyme, central domain; Pfam: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
   
 
 0.521
KOH44537.1
uroporphyrinogen-III C-methyltransferase; Pfam: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase.
  
 
 0.500
KOH46313.1
2-oxoisovalerate dehydrogenase subunit beta; Pfam: Transketolase, C-terminal domain; Pfam: Dehydrogenase E1 component; SMART: Transketolase, pyrimidine binding domain; Pfam: Transketolase, pyrimidine binding domain.
    
 0.497
KOH46133.1
Pfam: Dehydrogenase E1 component; SMART: Transketolase, pyrimidine binding domain; Pfam: Transketolase, C-terminal domain; Pfam: Transketolase, pyrimidine binding domain.
    
 0.497
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
 0.486
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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