STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45749.1Hypothetical protein; Pfam: Domain of unknown function (DUF4185). (486 aa)    
Predicted Functional Partners:
KOH45747.1
Pfam: Protein of unknown function (DUF2961).
 
     0.874
KOH45753.1
Pfam: Protein of unknown function (DUF2961).
 
     0.734
KOH42637.1
Pfam: Uncharacterized protein conserved in bacteria (DUF2264).
  
     0.706
KOH46769.1
Hypothetical protein; Pfam: SusD family; Pfam: Starch-binding associating with outer membrane.
  
 
  0.699
KOH45752.1
tonB-linked outer membrane protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: Domain of unknown function (DUF4480); Pfam: TonB dependent receptor; TIGRFAM: SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TIGRFAM: OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family.
 
     0.666
KOH45751.1
Glycan metabolism protein RagB; Pfam: SusD family; Pfam: Starch-binding associating with outer membrane.
 
 
  0.625
KOH45966.1
Hypothetical protein; Pfam: ATP-dependent DNA helicase recG C-terminal.
  
     0.616
KOH43157.1
Pfam: Cytochrome C oxidase, mono-heme subunit/FixO; Pfam: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: ccoO: cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: ccoN: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
   
  0.616
KOH45332.1
TIGRFAM: molyb_syn: molybdenum cofactor synthesis domain; Pfam: Competence-damaged protein; TIGRFAM: cinA_nterm: competence/damage-inducible protein CinA N-terminal domain; Pfam: Probable molybdopterin binding domain; SMART: Probable molybdopterin binding domain; TIGRFAM: cinA_cterm: competence/damage-inducible protein CinA C-terminal domain.
    
  0.610
KOH45748.1
Hypothetical protein.
       0.598
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.