STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45721.1Hypothetical protein; Pfam: DNA alkylation repair enzyme. (226 aa)    
Predicted Functional Partners:
KOH45720.1
Hypothetical protein.
       0.773
KOH45722.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis C-terminal domain; Pfam: Polysaccharide biosynthesis protein.
       0.773
KOH45719.1
Hypothetical protein; Pfam: Bax inhibitor 1 like.
       0.495
KOH46497.1
Hypothetical protein.
  
     0.491
KOH45770.1
Dihydrofolate reductase; Pfam: Peptidase family M49.
 
     0.419
KOH45723.1
TIGRFAM: octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family; Pfam: Cytochrome c554 and c-prime; Pfam: Cytochrome c bacterial.
       0.412
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.