STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45697.1Pfam: Protein of unknown function (DUF1049). (111 aa)    
Predicted Functional Partners:
KOH45696.1
Pfam: WbqC-like protein family.
       0.791
KOH43307.1
Hypothetical protein.
   
    0.690
KOH45698.1
TIGRFAM: sigpep_I_bact: signal peptidase I; PRINTS: Bacterial leader peptidase 1 (S26A) family signature; Pfam: Signal peptidase, peptidase S26; Belongs to the peptidase S26 family.
  
    0.578
KOH45699.1
Pfam: Dihydrodipicolinate reductase, C-terminus; Pfam: Dihydrodipicolinate reductase, N-terminus; TIGRFAM: dapB: dihydrodipicolinate reductase; Belongs to the DapB family.
       0.565
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.