STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45612.1Hypothetical protein; TIGRFAM: GldL_gliding: gliding motility-associated protein GldL. (323 aa)    
Predicted Functional Partners:
KOH46247.1
Hypothetical protein; Pfam: GldM N-terminal domain; Pfam: GldM C-terminal domain; TIGRFAM: GldM_gliding: gliding motility-associated protein GldM.
 
 
 
 0.989
KOH45610.1
Hypothetical protein; TIGRFAM: Bac_Flav_fam_1: Bacteroidetes-specific putative membrane protein; Pfam: Protein of unknown function (DUF3308).
 
   
 0.941
KOH45611.1
Hypothetical protein; Pfam: Sulfatase-modifying factor enzyme 1.
 
   
 0.931
KOH45629.1
Pfam: Outer membrane protein beta-barrel domain.
 
   
 0.826
KOH43043.1
Gliding motility protein; Pfam: Sulfatase-modifying factor enzyme 1.
 
   
 0.813
KOH46255.1
Hypothetical protein; SMART: Tetratricopeptide repeats.
  
   
 0.811
KOH43990.1
Hypothetical protein; TIGRFAM: surface_SprA: cell surface protein SprA; Pfam: Motility related/secretion protein.
  
   
 0.806
KOH46664.1
Hypothetical protein.
  
   
 0.802
KOH47154.1
TIGRFAM: GldD_lipo: gliding motility-associated lipoprotein GldD.
  
   
 0.801
KOH46248.1
Hypothetical protein; TIGRFAM: GldN: gliding motility associated protein GldN.
 
   
 0.784
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.