STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45557.1Carbohydrate-binding protein SusD; Pfam: SusD family; Pfam: Starch-binding associating with outer membrane. (536 aa)    
Predicted Functional Partners:
KOH44802.1
Pfam: ATP synthase alpha/beta family, beta-barrel domain; Pfam: ATP synthase alpha/beta family, nucleotide-binding domain.
  
 0.992
KOH44803.1
Pfam: ATP synthase alpha/beta family, beta-barrel domain; Pfam: ATP synthase alpha/beta family, nucleotide-binding domain.
  
 0.992
KOH44805.1
Hypothetical protein.
  
 0.987
KOH44801.1
Hypothetical protein; Pfam: ATP synthase subunit D.
  
 0.984
KOH44804.1
Pfam: Protein of unknown function (DUF2764).
  
 0.984
KOH44800.1
Hypothetical protein; Pfam: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family.
  
 0.983
KOH44799.1
H+transporting two-sector ATPase C subunit; Pfam: ATP synthase subunit C.
  
 0.962
atpE
H+-transporting two-stor ATPase; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.962
KOH45556.1
tonB-denpendent receptor; TIGRFAM: SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; Pfam: TonB dependent receptor; TIGRFAM: OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family.
 
     0.932
KOH45107.1
Hypothetical protein; Pfam: Leucine rich repeat; SMART: Leucine-rich repeats, typical (most populated) subfamily.
   
 
  0.739
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.