STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45505.1Hypothetical protein; Pfam: Domain of Unknown Function (DUF1599). (55 aa)    
Predicted Functional Partners:
KOH46874.1
Hypothetical protein.
  
     0.742
KOH45613.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4290).
  
     0.724
KOH44656.1
Pfam: OstA-like protein.
  
     0.671
KOH42509.1
Hypothetical protein.
  
     0.632
KOH44998.1
Chloromuconate cycloisomerase; Pfam: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; SMART: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Pfam: Enolase C-terminal domain-like; TIGRFAM: menC_gamma/gm+: o-succinylbenzoate synthase.
  
     0.617
KOH46878.1
Pyrophosphatase; Pfam: MazG nucleotide pyrophosphohydrolase domain.
  
     0.611
KOH44699.1
Pfam: Uroporphyrinogen-III synthase HemD.
  
     0.590
KOH45612.1
Hypothetical protein; TIGRFAM: GldL_gliding: gliding motility-associated protein GldL.
  
     0.579
KOH44135.1
Hypothetical protein; Pfam: Uncharacterized ACR, COG1399.
  
     0.579
KOH44778.1
Hypothetical protein; Pfam: Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.559
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.