STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45346.1Adenylate cyclase; SMART: Tetratricopeptide repeats; Pfam: Helix-turn-helix domain; Pfam: Tetratricopeptide repeat; SMART: helix_turn_helix, arabinose operon control protein. (598 aa)    
Predicted Functional Partners:
KOH43062.1
Histidine kinase; SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain.
     
 0.847
KOH45212.1
Hypothetical protein.
  
 
 0.765
KOH43813.1
Histidine kinase; Pfam: CHASE3 domain; Pfam: Response regulator receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; Pfam: His Kinase A (phospho-acceptor) domain; SMART: cheY-homologous receiver domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: His Kinase A (phosphoacceptor) domain.
   
 
 0.702
KOH46959.1
Glutamate synthase; Pfam: GXGXG motif; Pfam: Conserved region in glutamate synthase; Pfam: Glutamine amidotransferases class-II; Pfam: Glutamate synthase central domain.
    
  0.691
KOH45336.1
Hypothetical protein; Pfam: Peptidase family S41.
 
     0.683
KOH45341.1
Pfam: Beta-lactamase.
 
     0.634
KOH44518.1
Pfam: Beta-lactamase.
  
     0.634
KOH45130.1
Histidine kinase; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain; SMART: PAS domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: PAS fold; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: sensory_box: PAS domain S-box protein.
   
 
 0.628
KOH46843.1
Hypothetical protein; Pfam: PAS fold; Pfam: PAS domain; SMART: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain); TIGRFAM: sensory_box: PAS domain S-box protein; SMART: PAS domain.
  
 
 0.587
KOH44517.1
Pfam: Acyltransferase family.
 
     0.585
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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