STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45242.1Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (512 aa)    
Predicted Functional Partners:
KOH45241.1
Hypothetical protein; Pfam: Glycosyl hydrolase family 65 central catalytic domain; Pfam: Glycosyl hydrolase family 65, N-terminal domain; Pfam: Glycosyl hydrolase family 65, C-terminal domain.
 0.995
KOH43953.1
Maltose phosphorylase; Pfam: Glycosyl hydrolase family 65 central catalytic domain; Pfam: Glycosyl hydrolase family 65, N-terminal domain; Pfam: Glycosyl hydrolase family 65, C-terminal domain.
 0.986
KOH44674.1
Transcriptional antiterminator; Pfam: Glycosyltransferase family 20; TIGRFAM: T6PP: trehalose-phosphatase; TIGRFAM: HAD-SF-IIB: HAD hydrolase, family IIB; Pfam: Trehalose-phosphatase.
 
0.923
KOH45243.1
Pfam: Aconitase family (aconitate hydratase); PRINTS: Aconitase family signature; Pfam: Aconitase C-terminal domain; TIGRFAM: acon_putative: putative aconitate hydratase.
  
   0.801
KOH44676.1
Pfam: Glycosyl hydrolases family 15.
  
 0.766
KOH42601.1
Pfam: Protein of unknown function, DUF608; Pfam: beta-Glucocerebrosidase 2 N terminal.
   
 
  0.757
KOH45107.1
Hypothetical protein; Pfam: Leucine rich repeat; SMART: Leucine-rich repeats, typical (most populated) subfamily.
    
 0.745
KOH45111.1
Hypothetical protein; Pfam: Haloacid dehalogenase-like hydrolase.
  
  
  0.744
KOH42942.1
TIGRFAM: HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1; Pfam: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3; PRINTS: Haloacid dehalogenase/epoxide hydrolase family signature.
  
  
  0.739
KOH44361.1
RNA polymerase sigma54 factor; Pfam: Sigma-54, DNA binding domain; TIGRFAM: rpoN_sigma: RNA polymerase sigma-54 factor; Pfam: Sigma-54 factor, core binding domain; Pfam: Sigma-54 factor, Activator interacting domain (AID); PRINTS: Sigma-54 factor signature.
   
    0.725
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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