STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45027.1Pfam: Oxidoreductase family, NAD-binding Rossmann fold. (499 aa)    
Predicted Functional Partners:
KOH42847.1
Putative secreted glycosyl hydrolase; Pfam: Domain of Unknown Function (DUF1080).
 
     0.793
KOH42703.1
Glycosyl hydrolase; Pfam: Domain of Unknown Function (DUF1080).
  
     0.774
KOH45213.1
Hypothetical protein; Pfam: Domain of Unknown Function (DUF1080).
 
     0.750
KOH45043.1
Sugar phosphate isomerase; Pfam: Xylose isomerase-like TIM barrel.
 
 
  0.726
KOH45062.1
Hypothetical protein; Pfam: Domain of Unknown Function (DUF1080).
  
     0.680
KOH43966.1
Hypothetical protein; Pfam: Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.660
KOH42863.1
Hypothetical protein; Pfam: Domain of Unknown Function (DUF1080).
  
     0.655
KOH43223.1
Hypothetical protein; Pfam: Oxidoreductase family, C-terminal alpha/beta domain; TIGRFAM: TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence; Pfam: Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.652
KOH44079.1
Hypothetical protein; Pfam: Xylose isomerase-like TIM barrel; TIGRFAM: TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence.
 
 
  0.646
KOH45185.1
Putative multi-domain protein; Pfam: Domain of Unknown Function (DUF1080).
 
     0.618
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.