STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45056.1Hypothetical protein. (490 aa)    
Predicted Functional Partners:
KOH45057.1
ABC transporter, ATP binding component; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
     0.951
KOH45462.1
Hypothetical protein.
  
     0.681
KOH43860.1
Hypothetical protein; Pfam: Aspartyl protease.
  
     0.678
KOH45058.1
Pfam: Glycosyl hydrolases family 2, TIM barrel domain; Pfam: Glycosyl hydrolases family 2, sugar binding domain; Pfam: Glycosyl hydrolases family 2.
       0.636
KOH45055.1
Pfam: C-terminal domain of CHU protein family.
       0.590
KOH46884.1
Hypothetical protein; Pfam: PDZ domain; SMART: Domain present in PSD-95, Dlg, and ZO-1/2; Pfam: Aspartyl protease.
  
     0.524
KOH45863.1
Pfam: Outer membrane protein beta-barrel domain.
  
     0.469
KOH43797.1
Hypothetical protein.
  
     0.453
KOH43568.1
Hypothetical protein.
  
     0.433
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.427
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.