STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45065.1Hypothetical protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Pfam: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (427 aa)    
Predicted Functional Partners:
KOH43028.1
Hypothetical protein; Pfam: FtsX-like permease family; Pfam: MacB-like periplasmic core domain.
 
    0.848
KOH46597.1
Hypothetical protein; Pfam: FtsX-like permease family; Pfam: MacB-like periplasmic core domain.
 
    0.847
KOH44653.1
Macrolide ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
   0.831
KOH45092.1
Pfam: Outer membrane efflux protein.
 
  0.780
KOH43854.1
Membrane protein; Pfam: FtsX-like permease family; Pfam: MacB-like periplasmic core domain.
 
    0.780
KOH45623.1
Pfam: ABC transporter transmembrane region; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities; Pfam: Peptidase C39 family.
  
 0.638
KOH43325.1
Pfam: ABC transporter; Pfam: Peptidase C39 family; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter transmembrane region.
  
 0.638
KOH42553.1
Pfam: Outer membrane efflux protein.
  
  0.607
KOH43855.1
Pfam: Outer membrane efflux protein.
 
  0.594
KOH44110.1
Pfam: Outer membrane efflux protein.
  
  0.582
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.