STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44925.1Xylan 1,4-beta-xylosidase; Pfam: Cellulase (glycosyl hydrolase family 5); Pfam: Glycosyl hydrolases family 43. (1192 aa)    
Predicted Functional Partners:
KOH44924.1
Chromophore lyase; PRINTS: Glycosyl hydrolase family 8 signature; Pfam: Glycosyl hydrolases family 43; Pfam: Carbohydrate binding module (family 6); Pfam: Glycosyl hydrolases family 8.
     0.862
KOH44964.1
Carbohydrate-binding protein; Pfam: Carbohydrate binding module (family 6); SMART: Cellulose Binding Domain Type IV; Pfam: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     0.837
KOH44938.1
Hypothetical protein; Pfam: O-Glycosyl hydrolase family 30.
 
 
 0.827
KOH44940.1
Hypothetical protein.
 
  
 0.764
KOH44944.1
Endo-1,4-beta-xylanase; PRINTS: Glycosyl hydrolase family 10 signature; Pfam: Glycosyl hydrolase family 10; SMART: Glycosyl hydrolase family 10.
 
  
  0.749
KOH44923.1
Alpha-glucuronidase; Pfam: Glycosyl hydrolase family 67 middle domain; Pfam: Glycosyl hydrolase family 67 C-terminus.
     0.740
KOH44945.1
alpha-N-arabinofuranosidase; Pfam: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     0.731
KOH44941.1
Glycosyhydrolase.
  
  
  0.724
KOH46026.1
Endoglucanase; Pfam: N-terminal ig-like domain of cellulase; Pfam: Glycosyl hydrolase family 9.
  
 
  0.686
KOH44963.1
Hypothetical protein; Pfam: Alpha/beta hydrolase family; Pfam: Domain of unknown function (DUF303).
 
     0.665
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.