STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44956.1Pfam: Zinc-binding dehydrogenase; Pfam: Alcohol dehydrogenase GroES-like domain. (338 aa)    
Predicted Functional Partners:
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.899
KOH45225.1
Hypothetical protein; Pfam: SLBB domain; Pfam: 4Fe-4S dicluster domain; Pfam: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; SMART: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Pfam: Thioredoxin-like [2Fe-2S] ferredoxin; Pfam: Respiratory-chain NADH dehydrogenase 51 Kd subunit.
  
 
 0.773
KOH46133.1
Pfam: Dehydrogenase E1 component; SMART: Transketolase, pyrimidine binding domain; Pfam: Transketolase, C-terminal domain; Pfam: Transketolase, pyrimidine binding domain.
 
 
 0.735
KOH44955.1
Hypothetical protein; Pfam: Amidohydrolase.
 
 
  0.716
KOH46784.1
Transketolase; Pfam: Dehydrogenase E1 component; Pfam: Transketolase, C-terminal domain; Pfam: Transketolase, pyrimidine binding domain; SMART: Transketolase, pyrimidine binding domain.
  
 
 0.696
KOH46313.1
2-oxoisovalerate dehydrogenase subunit beta; Pfam: Transketolase, C-terminal domain; Pfam: Dehydrogenase E1 component; SMART: Transketolase, pyrimidine binding domain; Pfam: Transketolase, pyrimidine binding domain.
  
 
 0.696
KOH46542.1
MFS transporter; TIGRFAM: OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg.
    
 0.667
kbl
2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.587
KOH45441.1
8-amino-7-oxononanoate synthase; Pfam: Aminotransferase class I and II.
 
 
 0.587
KOH46446.1
Altronate oxidoreductase; PRINTS: Mannitol dehydrogenase signature; Pfam: Mannitol dehydrogenase C-terminal domain; Pfam: Mannitol dehydrogenase Rossmann domain.
 
  
 0.582
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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