STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44756.1Flagellar motor protein MotA; Pfam: MotA/TolQ/ExbB proton channel family. (270 aa)    
Predicted Functional Partners:
KOH44758.1
Pfam: Biopolymer transport protein ExbD/TolR.
 
 
 0.969
KOH44759.1
Pfam: Biopolymer transport protein ExbD/TolR.
 
 
 0.963
KOH45118.1
Pfam: Biopolymer transport protein ExbD/TolR.
 
 
 0.865
KOH45052.1
Cell envelope biogenesis protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.834
KOH46860.1
Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.792
KOH47043.1
Hypothetical protein.
  
     0.766
KOH42858.1
Hypothetical protein; SMART: Tetratricopeptide repeats.
  
     0.754
KOH45051.1
Hypothetical protein; Pfam: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: tonB_Cterm: TonB family C-terminal domain.
  
   0.742
KOH45175.1
Hypothetical protein.
  
     0.705
KOH44661.1
Hypothetical protein; Pfam: Carboxypeptidase regulatory-like domain; Pfam: BlaR1 peptidase M56; TIGRFAM: tonB_Cterm: TonB family C-terminal domain; Pfam: Gram-negative bacterial TonB protein C-terminal.
 
 
 0.695
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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