STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44696.1Pfam: Outer membrane efflux protein. (423 aa)    
Predicted Functional Partners:
KOH44695.1
Pfam: HlyD family secretion protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.971
KOH44694.1
Multidrug transporter AcrB; PRINTS: Acriflavin resistance protein family signature; Pfam: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.962
KOH44693.1
Hypothetical protein.
 
     0.923
KOH44692.1
Pfam: Protein of unknown function (DUF2892).
 
     0.901
KOH43869.1
Hypothetical protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
    0.682
KOH43141.1
Hypothetical protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Pfam: Biotin-lipoyl like; Pfam: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.666
KOH44408.1
Pfam: HlyD family secretion protein.
  
  0.660
KOH42554.1
Pfam: HlyD family secretion protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.628
KOH44110.1
Pfam: Outer membrane efflux protein.
  
  
  0.626
KOH46223.1
Hypothetical protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Pfam: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.618
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.