STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44593.1Pfam: Carbon starvation protein CstA; Pfam: C-terminal domain on CstA (DUF4161). (479 aa)    
Predicted Functional Partners:
KOH44594.1
Hypothetical protein.
       0.689
KOH44592.1
Hypothetical protein; Pfam: Melibiase.
 
     0.669
KOH44595.1
Hypothetical protein; Pfam: FAD dependent oxidoreductase.
  
    0.539
KOH43443.1
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
   
    0.534
KOH42917.1
acetyl-CoA synthetase; Pfam: AMP-binding enzyme C-terminal domain; Pfam: AMP-binding enzyme.
   
    0.534
KOH45211.1
Hypothetical protein; Pfam: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.475
KOH43916.1
Hypothetical protein; Pfam: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.472
KOH42491.1
Pfam: Proline dehydrogenase.
   
    0.465
KOH45381.1
Hypothetical protein; SMART: helix_turn_helix, arabinose operon control protein; Pfam: Helix-turn-helix domain; SMART: cheY-homologous receiver domain; PRINTS: AraC bacterial regulatory protein HTH signature; Pfam: Response regulator receiver domain.
   
  
 0.442
KOH45323.1
PRINTS: Glutamate-aspartate symporter signature; Pfam: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.431
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.