STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44475.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
KOH43163.1
Hypothetical protein; TIGRFAM: EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Pfam: CoA-binding domain; Pfam: Bacterial sugar transferase.
  
 
 0.915
KOH44476.1
Hypothetical protein; Pfam: O-Antigen ligase.
  
  
 0.809
KOH47117.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis/export protein; Pfam: Capsule biosynthesis GfcC; Pfam: SLBB domain.
  
 0.589
KOH46995.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis/export protein; Pfam: SLBB domain.
  
 0.589
KOH45553.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis/export protein.
  
 0.589
KOH43887.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis/export protein; Pfam: SLBB domain.
  
 0.589
KOH44473.1
Hypothetical protein.
       0.558
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.558
KOH43257.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis protein; Pfam: CoA-binding domain.
  
 
 0.530
KOH43252.1
Serine acetyltransferase; Pfam: Bacterial transferase hexapeptide (six repeats).
  
 
  0.450
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.