STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44269.1methylmalonyl-CoA carboxyltransferase; Pfam: Carboxyl transferase domain. (514 aa)    
Predicted Functional Partners:
KOH46787.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.986
KOH44532.1
Hypothetical protein; Pfam: Carbamoyl-phosphate synthase L chain, N-terminal domain; Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain; Pfam: Biotin-requiring enzyme; SMART: Biotin carboxylase C-terminal domain; Pfam: Biotin carboxylase C-terminal domain.
 
 0.986
KOH44268.1
Hypothetical protein; Pfam: Biotin-requiring enzyme.
  
 0.970
KOH46472.1
Biofilm PGA synthesis protein PgaD; Pfam: Biotin-requiring enzyme.
 
 0.927
KOH46786.1
Hypothetical protein; Pfam: Biotin-requiring enzyme.
 
 0.907
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.898
KOH46507.1
Pfam: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase.
 
 
 0.849
KOH46469.1
Hypothetical protein; Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: metmalonyl_epim: methylmalonyl-CoA epimerase.
 
 
 0.815
KOH43599.1
Oxaloacetate decarboxylase; Pfam: HMGL-like; Pfam: Biotin-requiring enzyme; Pfam: Conserved carboxylase domain.
  
 
 0.814
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 
 0.693
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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