STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44217.1Pfam: Protein of unknown function (DUF3341). (172 aa)    
Predicted Functional Partners:
KOH44216.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1; Pfam: Polysulphide reductase, NrfD.
 
  0.999
KOH43157.1
Pfam: Cytochrome C oxidase, mono-heme subunit/FixO; Pfam: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: ccoO: cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: ccoN: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.997
KOH44215.1
Hypothetical protein; Pfam: 4Fe-4S dicluster domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  0.995
KOH44214.1
Hypothetical protein; Pfam: Cytochrome c7; Pfam: Class III cytochrome C family.
 
 
   0.993
KOH45578.1
Hypothetical protein.
 
 
 0.986
KOH45579.1
Hypothetical protein; Pfam: Cytochrome C oxidase, cbb3-type, subunit III.
 
 
   0.985
KOH45587.1
Pfam: Cytochrome c oxidase subunit III.
 
 0.966
KOH45585.1
Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.952
KOH45588.1
PRINTS: Cytochrome c oxidase subunit I signature; Pfam: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 0.937
KOH45586.1
Hypothetical protein; TIGRFAM: caa3_sub_IV: caa(3)-type oxidase, subunit IV; Pfam: Prokaryotic Cytochrome C oxidase subunit IV.
   
 0.900
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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