STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44169.1Beta-hexosaminidase; Pfam: PA14 domain; SMART:; Pfam: Glycosyl hydrolase family 20, catalytic domain; Pfam: Chitobiase/beta-hexosaminidase C-terminal domain; PRINTS: Glycosyl hydrolase family 20 signature; Pfam: Glycosyl hydrolase family 20, domain 2. (780 aa)    
Predicted Functional Partners:
KOH43417.1
beta-L-N-acetylhexosaminidase; Pfam: Glycosyl hydrolase family 3 C-terminal domain; Pfam: Beta-lactamase; Pfam: Glycosyl hydrolase family 3 N terminal domain.
    
  0.704
KOH43939.1
Beta-mannosidase; Pfam: Glycosyl hydrolases family 2, sugar binding domain; Pfam: Glycosyl hydrolases family 2; Pfam: Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
  
  0.684
KOH44168.1
Beta-galactosidase; SMART: Beta galactosidase small chain; Pfam: Glycosyl hydrolases family 2; Pfam: Glycosyl hydrolases family 2, sugar binding domain; Pfam: Glycosyl hydrolases family 2, TIM barrel domain; PRINTS: Glycosyl hydrolase family 2 signature; Pfam: Beta galactosidase small chain.
  
  0.602
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.583
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
   
 0.577
KOH45410.1
beta-N-acetylhexosaminidase; Pfam: Glycosyl hydrolase family 20, catalytic domain; PRINTS: Glycosyl hydrolase family 20 signature; Pfam: Glycosyl hydrolase family 20, domain 2.
  
  
 
0.571
KOH44167.1
Pfam: Sulfatase.
  
  0.547
KOH45306.1
Pfam: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.545
KOH42821.1
Histidine ammonia-lyase; Pfam: Aromatic amino acid lyase; TIGRFAM: hutH: histidine ammonia-lyase.
   
    0.539
KOH44713.1
Sialidase; Pfam: BNR repeat-like domain.
 
 0.518
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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