STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44210.1Hemolysin; Pfam: Acyltransferase; SMART: Phosphate acyltransferases; Pfam: Acetyltransferase (GNAT) domain. (596 aa)    
Predicted Functional Partners:
KOH44209.1
Hypothetical protein.
       0.605
KOH43860.1
Hypothetical protein; Pfam: Aspartyl protease.
  
     0.587
KOH44211.1
Hypothetical protein; Pfam: Radical SAM N-terminal; SMART: Elongator protein 3, MiaB family, Radical SAM; Pfam: Radical SAM superfamily; TIGRFAM: SAM_YgiQ: uncharacterized radical SAM protein YgiQ.
       0.516
KOH42651.1
Hypothetical protein; Pfam: Receptor family ligand binding region; Pfam: LysM domain; SMART: Lysin motif.
  
     0.445
KOH45539.1
Hypothetical protein.
  
     0.437
KOH45639.1
Hypothetical protein.
  
     0.416
KOH44212.1
Pfam: Protein of unknown function (DUF4197).
       0.416
KOH43027.1
Pfam: Plasmid pRiA4b ORF-3-like protein.
  
     0.414
KOH43983.1
Pfam: Protein of unknown function (DUF3098).
  
     0.406
KOH44526.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.