STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44066.1Alpha-galactosidase; PRINTS: Glycosyl hydrolase family 27 signature; Pfam: Melibiase. (456 aa)    
Predicted Functional Partners:
KOH44858.1
Hypothetical protein; Pfam: Glycoside hydrolase 97; Pfam: Glycosyl-hydrolase 97 N-terminal; Pfam: Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
  
  0.727
KOH44063.1
Beta-xylosidase; Pfam: Glycosyl hydrolases family 43.
      0.713
KOH42918.1
Non-reducing end alpha-L-arabinofuranosidase; SMART: Alpha-L-arabinofuranosidase C-terminus; Pfam: Alpha-L-arabinofuranosidase C-terminus.
  
    0.695
KOH44250.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
  0.692
KOH44399.1
Beta-galactosidase; Pfam: Glycosyl hydrolases family 2, sugar binding domain; Pfam: Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.681
KOH44064.1
Pfam: Glycosyl hydrolases family 2, sugar binding domain; Pfam: Glycosyl hydrolases family 2, TIM barrel domain; PRINTS: Glycosyl hydrolase family 2 signature; Pfam: Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.681
KOH43817.1
Hypothetical protein; Pfam: Glycosyl hydrolase family 65, N-terminal domain.
  
     0.624
KOH44065.1
Pfam: Alpha-L-arabinofuranosidase C-terminus; SMART: Alpha-L-arabinofuranosidase C-terminus; Pfam: Carbohydrate binding domain.
    0.615
KOH44866.1
Pfam: Glycosyl hydrolase family 65, N-terminal domain.
  
     0.608
KOH45949.1
alpha-L-fucosidase; Pfam: Glycosyl hydrolase family 65, N-terminal domain.
  
     0.588
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.