STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH44012.1Glycoside hydrolase; SMART: Lysozyme subfamily 2; Pfam: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Pfam: LysM domain; SMART: Lysin motif. (313 aa)    
Predicted Functional Partners:
KOH44938.1
Hypothetical protein; Pfam: O-Glycosyl hydrolase family 30.
  
  
 0.820
KOH43041.1
Hypothetical protein; Pfam: Peptidase family C25.
  
  
 0.820
KOH43165.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4294).
  
     0.645
KOH44011.1
Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region.
       0.556
KOH45613.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4290).
 
     0.551
KOH43025.1
Pfam: NUDIX domain.
  
     0.533
KOH43983.1
Pfam: Protein of unknown function (DUF3098).
  
     0.507
KOH45639.1
Hypothetical protein.
  
     0.462
KOH44390.1
RNA-binding protein S4; Pfam: S4 domain.
  
     0.459
KOH46248.1
Hypothetical protein; TIGRFAM: GldN: gliding motility associated protein GldN.
  
     0.441
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.