STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43974.1Mannose-6-phosphate isomerase; Pfam: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (392 aa)    
Predicted Functional Partners:
KOH43972.1
Serine acetyltransferase; Pfam: Bacterial transferase hexapeptide (six repeats).
 
 0.992
KOH43163.1
Hypothetical protein; TIGRFAM: EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Pfam: CoA-binding domain; Pfam: Bacterial sugar transferase.
 
 0.942
KOH43257.1
Hypothetical protein; Pfam: Polysaccharide biosynthesis protein; Pfam: CoA-binding domain.
 
 0.940
KOH43971.1
Pfam: Oxidoreductase family, NAD-binding Rossmann fold; Pfam: Oxidoreductase family, C-terminal alpha/beta domain.
 
 
  0.904
KOH46505.1
Hypothetical protein; Pfam: Oxidoreductase family, C-terminal alpha/beta domain; Pfam: Oxidoreductase family, NAD-binding Rossmann fold.
 
  0.899
KOH43216.1
TIGRFAM: dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase; Pfam: NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.878
KOH43979.1
Hypothetical protein; Pfam: Polysaccharide pyruvyl transferase; Pfam: Methyltransferase domain.
    
 0.749
KOH47111.1
Nucleotide sugar dehydrogenase; SMART: UDP binding domain; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; TIGRFAM: NDP-sugDHase: nucleotide sugar dehydrogenase; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, central domain; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.735
KOH43978.1
Acylneuraminate cytidylyltransferase; TIGRFAM: YrbI-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; Pfam: Cytidylyltransferase; Pfam: haloacid dehalogenase-like hydrolase.
  
  
 0.709
KOH43977.1
N-acetylneuraminate synthase; Pfam: NeuB family.
  
  
 0.701
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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